PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022970969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 373aa MW: 42031.2 Da PI: 7.0467 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.9e-17 | 73 | 120 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +++++G+g+W+++++ g+ R+ k+c++rw +yl XP_022970969.1 73 KGPWTPEEDIVLVSYIQEHGPGNWRAVPANTGLLRCSKSCRLRWTNYL 120 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.5 | 4.9e-16 | 126 | 171 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w++yl XP_022970969.1 126 RGNFTHHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNHWNTYL 171 89********************.*********.*************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 373 aa Download sequence |
MEWLCQTLMP PLTPSSPPHL LHISKSASQS FYLYTPRQPA IPHFSLLNQH TNLLSLHFQM 60 GRPPCCDKQG VKKGPWTPEE DIVLVSYIQE HGPGNWRAVP ANTGLLRCSK SCRLRWTNYL 120 RPGIKRGNFT HHEEKMIIHL QALLGNRWAA IASYLPQRTD NDIKNHWNTY LKKKLNNNNH 180 HHHHPSPATD LSAAGGGDAR GQWERRLQTD IQMAKQALSD ALSPETSKPP PPPPPPKPVD 240 PKTPHHQIPT YASSADNIAR WLKEWNKNSP GNNRRRSSSP PAMESGNFGG EHGGGIKEVG 300 LSESIESFLG FDSFESSNSD LSPETSVFQG ESETDESEEL LPMELLEKWL HEDSKDYYFS 360 DIIADEKLKC DLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G28910.1 | 4e-92 | MYB family protein |