PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022970714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 402aa MW: 46051.6 Da PI: 4.8614 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 7.7e-19 | 197 | 247 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r r +lg+f+tae+Aa a+++ + kl+ge XP_022970714.1 197 LYRGVRQRH-WGKWVAEIRLPRN---RNRLWLGTFDTAEDAALAYDREAFKLRGE 247 59******9.**********965...48*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MSHFKSSDCS NFSLTQTEQH MDEDKQIDHN DLESSFRRRQ GKPEQDETSV SPRPFKKIRD 60 PENHDPIHPL DSTSQQSFPF LNPASSVSHA SPSSARALLP FALETPQFSH QFKTEPVAPM 120 PHRPSLLPTH NQQQLAPPAS TQYGFGYPPY FMGEFASFQQ HQQQQHQQFL QYWNDSLDSN 180 SKGGFRPQVR PLNTTKLYRG VRQRHWGKWV AEIRLPRNRN RLWLGTFDTA EDAALAYDRE 240 AFKLRGENAR LNFPELFLNK DKEEASQTSG EELPPQKELN NNNNLDNDFE LEPNNETVAE 300 DNIHEDEAED AGEGVSKSQE MVWREMAEAW LNVMPAGWGP GSPVWDDLDT TNNLLLQPHL 360 PFANPIHQES FTSDLQMQQF NLTATSPSSS CSMKPFFLKD ED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20880.1 | 4e-47 | ERF family protein |