PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970498.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 212aa MW: 24792.9 Da PI: 5.4036

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv+ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_022970498.1 10 KGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRTGKSCRLRWVNYL 57 79********************************************97 PP
2	Myb_DNA-binding	53.7	4.7e-17	63	108	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+ E+ l++d++ ++G++ W++Iar+++ gRt++++k++w++++ XP_022970498.1 63 RGKITPHEERLILDLHSKWGNR-WSRIARKLP-GRTDNEIKNFWRTHM 108 8999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MVLQEESMRK GPWTEQEDFQ LVCFVGLFGD RRWDFIAKVS GLKRTGKSCR LRWVNYLHPG 60 LKRGKITPHE ERLILDLHSK WGNRWSRIAR KLPGRTDNEI KNFWRTHMRK VVKAASHDHV 120 VVSPSSSAQI IEIGEELLDR REEEEDGYSM DDIWRDIDDQ SNVINQVCDQ SNFECGPMSM 180 SMPPWDYGEY SPWTVVEEEN KVFDYGEAVA LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	4e-70	MYB family protein