PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970183.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 213aa    MW: 24700.3 Da    PI: 9.3914
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970183.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.61.1e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+s+
  XP_022970183.1  9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSN 59
                    79***********************************************95 PP
2K-box62.61.5e-21941692095
           K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     ++  + k++e L+ ++R+llG +L+s+s+ eLqqLe+qLe+sl+kiRs+K+++l+e+i +l++ ek l een aL+
  XP_022970183.1  94 DSFTITKKLEHLEVSKRKLLGGGLDSCSIDELQQLERQLERSLTKIRSRKYQILKEEIMKLKEEEKLLLEENAALQ 169
                     3335899******************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSNF  60
SMNKTIDRYQ NRTKDLMSSN NTAVEDLQLE KELDSFTITK KLEHLEVSKR KLLGGGLDSC  120
SIDELQQLER QLERSLTKIR SRKYQILKEE IMKLKEEEKL LLEENAALQV GRESSKKGET  180
KQRSESKEQD IMDVETELFI GLPERRTTTN GFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.16e-61MIKC_MADS family protein