PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022970071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 316aa MW: 34957.8 Da PI: 4.532 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.6e-19 | 112 | 162 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g XP_022970071.1 112 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 162 59********.**********72....45*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MGFDSVFGRP IKYSEHLNHV KLTSVPETRQ RVVRISVSDG DATDSSSDDE PEMFGRQRVK 60 KFVNEITIEP SCSGEGNGIW GGNRSERIGL RRSPGKCGVS KNRRSVKPLI GKKFRGVRQR 120 PWGKWAAEIR DPLRRVRLWL GTYDTAEEAA MVYDNAAIQL RGPDALTNFT TQPPKSSSGK 180 CADYNSGEES NNNICSPTSV LRCPSPAIEE IHLQIPGEPD NSCMSENLTS EFSSCSDTFI 240 PDDIFAFETT IPTLFDELGD GSFNDFFSDD GSFNGVFHSP VEEIGSGLVF EYPTPPPDDF 300 FQDFSDVFGS DPLVVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 7e-46 | ERF family protein |