PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969767.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 267aa    MW: 30288.8 Da    PI: 10.1393
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP141.75.8e-44942202131
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssasnsssgkaak 92 
                     ++kkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWLl  ++ aik+l +++++s     s+c+ +s+++s++        +
  XP_022969767.1  94 TVKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALKNNNNNSGvshgSACSGSSEVVSKQ-------DA 181
                     78**************************************************************5555533336665555555544.......33 PP

             TCP  93 saakskksqksaasalnlakesrakarararertrekmr 131
                         + +++k+  + + + +esra+arararert  k++
  XP_022969767.1 182 GGSIGTPKHKKGRQLQTIGRESRARARARARERTMLKKS 220
                     34456666666666678888**************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDQEHEENSS YLHFPHPFLD DDLFLTHLLS QQQQLVSGGD CWKDQEQEQE KEDDVGHDHK  60
QNSEKKGRRS LEVKKKKKKC NSNRKNGSST TKRTVKKDRH SKICTAQGPR DRRMRLSLQI  120
ARKFFDLQDM LGFDKASKTI EWLLSHSNSA IKALKNNNNN SGVSHGSACS GSSEVVSKQD  180
AGGSIGTPKH KKGRQLQTIG RESRARARAR ARERTMLKKS PQPISISQHY LNSDETHLED  240
CPKVFAFSDD LSSIHTFFSG NITTFLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204214RARARARARER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-32TCP family protein