PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022969734.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 369aa MW: 41358.9 Da PI: 6.5065 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.8 | 2.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l+++++ +G g+W+++++ g+ R++k+c++rw +yl XP_022969734.1 14 KGLWSPDEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 45 | 2.5e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++ E++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022969734.1 67 RGPFSQHEEDLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89********************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPD EDEKLLNYIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGPF SQHEEDLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG 120 IDPNTHKPVS VSGDADNDSE KQLPPTSTSH RSNDNSSDEA IETPLPIVTS SNSSSQIYSP 180 TQEFFRFQTT TAGSHRASEL VEFLSFHNLN YVSEIPNPNP NSLCFNQTSH LLPPPPIPLK 240 PTWEGTDFAA AAAATASGGN SFFDGGNFPW GLPECEKTEK LHPTAIREDK KWSEIMENPF 300 MMGNTTGEQN QESQSQNESM YVENLSTAAE TEFITESGWQ SQTQRQQASS DAVYNKHLHT 360 LTVSFGHTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 2e-89 | MYB family protein |