PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969629.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 850aa    MW: 92967.6 Da    PI: 6.0485
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969629.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.62.1e-182885457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L + +    +++ +q+kvWFqNrR +ek+
  XP_022969629.1 28 YVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCpilaNIEPKQIKVWFQNRRCREKQ 85
                    5789****************************************************97 PP
2START150.81.2e-471693722200
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee ++++++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++    e+l+d++ W ++++++e+     +g  g+++l 
  XP_022969629.1 169 IAEEILAAFLSKATGTAIDWVQLPGMKPGPDSVGIFAVSQSCSGVAARACGLVSLEPM-KIDEILKDRPSWFRNCRSVEVFTMFPTGngGTIELV 262
                     789999****************************************************.8999999999*****************999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++ +a+++l+p Rdf+++Ry+++l+ g ++++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l+ +++++++r+l+
  XP_022969629.1 263 YTQVYAPTTLAPaRDFWTLRYTKTLENGNLAVCERSLSGSGAGPNsasAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVVRPLY 357
                     **************************************9988888788999******************************************** PP

                     HHHHHHHHHHHHHHT CS
           START 186 ksglaegaktwvatl 200
                     +s+ a ++k++ a++
  XP_022969629.1 358 ESSKAVAQKMTIAAF 372
                     **********99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    
MAMAMATAHH RESGDGGIDG HLDSTGKYVR YTTEQVEALE RVYAECPKPS SLRRQQLVRD  60
CPILANIEPK QIKVWFQNRR CREKQRKEAS RLQSLNSKLT AMNKLLMEEN DRLQKHVSQL  120
ICENGSMRQH LQTANAPAAP VTDASCDTVA TTPQHSLRDA SSPAGLLSIA EEILAAFLSK  180
ATGTAIDWVQ LPGMKPGPDS VGIFAVSQSC SGVAARACGL VSLEPMKIDE ILKDRPSWFR  240
NCRSVEVFTM FPTGNGGTIE LVYTQVYAPT TLAPARDFWT LRYTKTLENG NLAVCERSLS  300
GSGAGPNSAS AAQFVRAEML PSGYLIRPCD GGGSIIHIVD HLNLEPWSVP EVVRPLYESS  360
KAVAQKMTIA AFLYVRQVAQ ETSGEVVYSL GRQPAVLRTF SQRLSRGFNE AVNGFNDDGW  420
SLMNYDGAED VSLAINSSKN VNTSYDPVNS LAFHAGVLCA KASMLIQNVP PIALIRFLRE  480
HRSEWADFNV DAYSAASLKT GSYVYPGMRP TRFTGSQIIM PLGHTIEQEE LLEVVRLESH  540
PLAQEDTFMS RDVHLLQMCT GIDENAVGAC SELVFAPINE MFPDDAVLLP SGFRIIPLHS  600
ETGDSKHTWK NLNSTMDLTS NLEVGSSASQ DAAAASTSNF RSVLTIAFQF SFGSNLQDDV  660
AAMARQYVRS VVSAVQRVAV AMSPSGLSLP SERRLSSACP EALTLARWIC YSYRCHTGTE  720
LVLSDSVDGG DSVLKHLWNH QDAILCCSLK SLPPVFMFAN QAGLDMLETT LVALQDITLD  780
KILGDSAHKA FSADFSNLMH QGFAYIPAGI CISTMGRHAS FEQAIAWKVL AEDESTVHCL  840
AFSFVNWSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein