PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969510.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 249aa MW: 27726.5 Da PI: 8.668

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ ++k +G g+W++ ++ g+ R++k+c++rw +yl XP_022969510.1 14 KGAWTKEEDGRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53	7.7e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+ Ed+l+++++ +lG++ W++Ia +++ gRt++++k++w+++ XP_022969510.1 67 RGNFTQLEDDLIIKLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDGRLIAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TQLEDDLIIK LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HIKRKLLSQG 120 IDPTTHRSIS GSSIAKHPAT TISFASNFTL EDQEDGKKPV MNSYNPTEEE QCLDLNLDLR 180 ISPPPYTAAT VKNEGRNSLC FFCSLGFENS KNCSCGNGKI IASSDGNGNG YDFLGLKSCV 240 LDCRSLEIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	1e-102	MYB family protein