PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022969354.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 314aa MW: 35064.7 Da PI: 10.1509 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 364.5 | 2.1e-111 | 1 | 314 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye..............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalver 77 mdd ++e r+k y++ ++ ++l +++++ms+iaerda+irernlalsekk+a+a+rd+a++qrd+a+a+r+ al+er XP_022969354.1 1 MDDGRHHEngRHKLdYFRgspspwhmapphhvKEpNALV--MNKKIMSIIAERDAAIRERNLALSEKKGALAARDEALQQRDEAIAQRDSALMER 93 777766666888887888999999999876663335666..99**************************************************** PP GAGA_bind 78 dnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkk..kkk 170 dn+l+al+ ++n+ s+ p g ++ ++tk +++l + + p ++++++++++ ++++a+pi+ a+ea ++++ +++ + +k+ ++k++k kk XP_022969354.1 94 DNALAALEIRDNA--SNFPLGNGIQRKTKRLHHLSN-HMPSMSETPYGTKDVHITDAFPITVIASEAVKSRQGNRTTTDNKAVSSKTSKLprKKV 185 *********9998..77899999*********9998.77****************************9999999888888888888776511344 PP GAGA_bind 171 sekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgaf 265 +e+ +++ ++++ ++ +++++ +d++ln vs+D+s++P+P+CsCtG rqCYkWGnGGWqS+CCtt +S+yPLP ++++r+ R++grKmS+++f XP_022969354.1 186 GEDLNRQAATDG--TKYRTDWDGQDVGLNLVSFDDSSMPAPICSCTGLARQCYKWGNGGWQSSCCTTHMSMYPLPHMPNKRHVRMGGRKMSGSVF 278 445555555444..78******************************************************************************* PP GAGA_bind 266 kklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +klL++Laa G+dls pvDLkdhWA+HGtn+++tir XP_022969354.1 279 TKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR 314 ***********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MDDGRHHENG RHKLDYFRGS PSPWHMAPPH HVKEPNALVM NKKIMSIIAE RDAAIRERNL 60 ALSEKKGALA ARDEALQQRD EAIAQRDSAL MERDNALAAL EIRDNASNFP LGNGIQRKTK 120 RLHHLSNHMP SMSETPYGTK DVHITDAFPI TVIASEAVKS RQGNRTTTDN KAVSSKTSKL 180 PRKKVGEDLN RQAATDGTKY RTDWDGQDVG LNLVSFDDSS MPAPICSCTG LARQCYKWGN 240 GGWQSSCCTT HMSMYPLPHM PNKRHVRMGG RKMSGSVFTK LLSRLAAAGH DLSVPVDLKD 300 HWARHGTNRY ITIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 1e-133 | BBR-BPC family protein |