PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969236.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 248aa MW: 29074.6 Da PI: 6.7894

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ede+l+ +v+++G +W+ +r g+ R++k+c++rw +yl XP_022969236.1 14 KGAWSPDEDEKLKAYVHKHGHCNWRELPRFAGLSRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	49	1.4e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+ l++++++++G++ W++ a ++ gRt++++k++w+++l XP_022969236.1 67 RGNYSKEEERLILQLHQEHGNK-WSLMATKLS-GRTDNEIKNYWHTHL 112 899*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MVRAPYFDEN GLKKGAWSPD EDEKLKAYVH KHGHCNWREL PRFAGLSRCG KSCRLRWINY 60 LCPDVKRGNY SKEEERLILQ LHQEHGNKWS LMATKLSGRT DNEIKNYWHT HLKKKVKASK 120 VKKKQQNEAI SMKEREPEMK ANLISEVPSH EILESSPFSP LSSEISTVCS NQESTQDSPP 180 TTFKFQETSN NNNGDFWDVP FLVDNLEAQS QDPMFFHVNY DFEFDQADLF YQVMKELPEN 240 YQPYLYPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10280.1	3e-54	MYB family protein