PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969065.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 501aa MW: 54909.3 Da PI: 6.1447

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.5e-17	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l+++vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_022969065.1 34 KGPWTAAEDGILIEYVKKHGEGNWNAVQKHTGLARCGKSCRLRWANHL 81 79******************************************9986 PP
2	Myb_DNA-binding	47.8	3.3e-15	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ +++++++lG++ W++ a+ ++ gRt++++k++w++ XP_022969065.1 87 KGSFSQEEERVIIELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 130 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MVESKGEKGR SEGEHHHLAS GDGGCDGGGR ALKKGPWTAA EDGILIEYVK KHGEGNWNAV 60 QKHTGLARCG KSCRLRWANH LRPNLKKGSF SQEEERVIIE LHAKLGNKWA RMAAQLPGRT 120 DNEIKNYWNT RMKRRQRAGL PLYPLEIQQE AMAFHLQQHQ HHHHQQQQQH HSSSAAAVAT 180 NFSAIRHKPD FNNNHPNSVS IFNFSSSIDN SQKNFSDGSS LYAAPTSQFN FFPENNNGGR 240 FALPLSPVSP FSQIGQQMNQ SLSTPPQASF QLNYGDYYVC NSNSGLNSMI LGAPYHHLIP 300 GLETELPSIQ TPPLSTTPAS SGTSGGDGIM VGTNSGLLDV VLQEAEARSR NEKQSKEETS 360 SAGELKQRTE QGSTEEDDAN LHAESVLGSS GGEEAAAAAE NYSDEFSSSY SSSRKKPRME 420 PLEEMNSMDD DDLMSLLNNF QSGMPVPEWY PGSSDDDLGI NLHNGPSSRK LNGNGEEDVS 480 SSRVLEWSLG SSCWNNMPSI C

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MVESKGEKGR SEGEHHHLAS GDGGCDGGGR ALKKGPWTAA EDGILIEYVK KHGEGNWNAV  60
QKHTGLARCG KSCRLRWANH LRPNLKKGSF SQEEERVIIE LHAKLGNKWA RMAAQLPGRT  120
DNEIKNYWNT RMKRRQRAGL PLYPLEIQQE AMAFHLQQHQ HHHHQQQQQH HSSSAAAVAT  180
NFSAIRHKPD FNNNHPNSVS IFNFSSSIDN SQKNFSDGSS LYAAPTSQFN FFPENNNGGR  240
FALPLSPVSP FSQIGQQMNQ SLSTPPQASF QLNYGDYYVC NSNSGLNSMI LGAPYHHLIP  300
GLETELPSIQ TPPLSTTPAS SGTSGGDGIM VGTNSGLLDV VLQEAEARSR NEKQSKEETS  360
SAGELKQRTE QGSTEEDDAN LHAESVLGSS GGEEAAAAAE NYSDEFSSSY SSSRKKPRME  420
PLEEMNSMDD DDLMSLLNNF QSGMPVPEWY PGSSDDDLGI NLHNGPSSRK LNGNGEEDVS  480
SSRVLEWSLG SSCWNNMPSI C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	4e-72	MYB family protein