PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022969002.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 698aa MW: 80706.9 Da PI: 6.9215

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022969002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.6e-24	76	167	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++++ HnHel XP_022969002.1 76 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGYNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVSQWYVSQFSNVHNHELL 167 69******************8888.**************************************998767789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MFSPEMAMKL PANIWIRRQQ CPCGDWKCYI RYEGEDQASI SARLVKSETV PSQLSSESVF 60 APYVGQIFKS DEDAFEYYSN FARKNGFSIR KARSTESQNL GVYRRDFVCY RSGYNQPRKK 120 ANVEHPRERK SVRCGCDAKL YLTKEIVDGV SQWYVSQFSN VHNHELLEDD QVRLLPAYRK 180 IQEADQERIL LLSKAGFPVN RILKVLELEK GVQPGQLPFI EKDVRNFVRT CKKTVEENDA 240 FLNEKRENEL LELLEICKAM AKRDTEFVFD YTRDENGKVE NLSWAYGDPI HAYSVFGDVV 300 SFDMSYRSLT YGLLLGVWFG MSNHGKAIIF SCVLLQEENS HSFSWALQKF VQFMRGKHPR 360 TILTDIDSGL RDAISRELPN TKHVVCIWHI LSKLSSWFLL PLGLHYADFK VQFDMLWHLE 420 NISDFEHQWD LLVAQFGLAS DKHIALLYLY RASWPFSFIK SSFLARTLTA DFFQSLETFL 480 KRILGAQTCL QVFFEQVSNA AYSGSRAKEG MQYLHIKTGM PIEEHAQGTL TPYAFNALQN 540 EIVLSMQYVA TEMGNGSYLL QHYKKMDVER LVSWTQDDEQ VHCACKEFDH SGILCRHSIR 600 VLAVKNYFKL PDKYFLLRWR LQNSLGTIDD AHSQGRSEAC AQAFHSLAAT LLTESLVSQE 660 RFNYVHRELS GLLEHVRTMP VVDEFSLNTT TVNEFNDP

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MFSPEMAMKL PANIWIRRQQ CPCGDWKCYI RYEGEDQASI SARLVKSETV PSQLSSESVF  60
APYVGQIFKS DEDAFEYYSN FARKNGFSIR KARSTESQNL GVYRRDFVCY RSGYNQPRKK  120
ANVEHPRERK SVRCGCDAKL YLTKEIVDGV SQWYVSQFSN VHNHELLEDD QVRLLPAYRK  180
IQEADQERIL LLSKAGFPVN RILKVLELEK GVQPGQLPFI EKDVRNFVRT CKKTVEENDA  240
FLNEKRENEL LELLEICKAM AKRDTEFVFD YTRDENGKVE NLSWAYGDPI HAYSVFGDVV  300
SFDMSYRSLT YGLLLGVWFG MSNHGKAIIF SCVLLQEENS HSFSWALQKF VQFMRGKHPR  360
TILTDIDSGL RDAISRELPN TKHVVCIWHI LSKLSSWFLL PLGLHYADFK VQFDMLWHLE  420
NISDFEHQWD LLVAQFGLAS DKHIALLYLY RASWPFSFIK SSFLARTLTA DFFQSLETFL  480
KRILGAQTCL QVFFEQVSNA AYSGSRAKEG MQYLHIKTGM PIEEHAQGTL TPYAFNALQN  540
EIVLSMQYVA TEMGNGSYLL QHYKKMDVER LVSWTQDDEQ VHCACKEFDH SGILCRHSIR  600
VLAVKNYFKL PDKYFLLRWR LQNSLGTIDD AHSQGRSEAC AQAFHSLAAT LLTESLVSQE  660
RFNYVHRELS GLLEHVRTMP VVDEFSLNTT TVNEFNDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein