PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 371aa MW: 41484.4 Da PI: 7.5413 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.7 | 5.4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ede+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_022968839.1 14 KGLWSPDEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022968839.1 67 RGPFSQQEEDLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89********************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPD EDEKLLNYIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGPF SQQEEDLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG 120 IDPNTHKPVC VSADVDNESE NNKVPATPTS HRSNDNSSDE ATNKSTETTP LPIIANPHNS 180 NSQIYPQTPQ DFFRFQTSTT NAPSEMVDYL SFHHLNYAPS RIPNPNPTSL CFNLPPPPIP 240 TKPQVPTWEG TTFTGGVGGN NHFYDAGNFS WGGLPDCAKS EKLNPTAIPE DIKWSEFVGN 300 PYMVMGNAAA AVQNQEFQFQ TEPMYVENIS RGTAAETGFI TEAGWQRQQA SSDAVYNKHL 360 HTLTVSFGNT L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 5e-91 | MYB family protein |