PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 409aa MW: 45623.1 Da PI: 7.6085 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.9 | 3.1e-10 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g W+++Ede+l+++++++G g+W+++++ g XP_022968838.1 14 KGLWSPDEDEKLLNYITKHGHGCWSSVPKLAG 45 678*************************9987 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.6e-14 | 105 | 148 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_022968838.1 105 RGPFSQQEEDLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 148 89********************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPD EDEKLLNYIT KHGHGCWSSV PKLAGSHQYH PFSFSIHTNL 60 SLSLSLSLSL SLTSPLHSSF LLGLQRCGKS CRLRWINYLR PDLKRGPFSQ QEEDLIIELH 120 AVLGNRWSQI AAQLPGRTDN EIKNLWNSCI KKKLRQKGID PNTHKPVCVS ADVDNESENN 180 KVPATPTSHR SNDNSSDEAT NKSTETTPLP IIANPHNSNS QIYPQTPQDF FRFQTSTTNA 240 PSEMVDYLSF HHLNYAPSRI PNPNPTSLCF NLPPPPIPTK PQVPTWEGTT FTGGVGGNNH 300 FYDAGNFSWG GLPDCAKSEK LNPTAIPEDI KWSEFVGNPY MVMGNAAAAV QNQEFQFQTE 360 PMYVENISRG TAAETGFITE AGWQRQQASS DAVYNKHLHT LTVSFGNTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 4e-83 | MYB family protein |