PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968324.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 492aa MW: 54972.9 Da PI: 4.9676

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.2	2.6e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yL+ k++g++ e+ +vi+e+d++k+ePwdLp + +k+++ ew+fF+++d+ky++g+r +rat++gyWkatgkd++++ XP_022968324.1 9 LPLGFRFRPTDEELINFYLRSKINGNHEEV-SVIREIDVCKWEPWDLPdlSIIKTKDPEWFFFCPQDRKYPNGHRLKRATDAGYWKATGKDRKIK 102 699**********************888.99**********96447788889*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfykgrapkg++t+Wv+heyr+ XP_022968324.1 103 S-GTNLIGMKKTLVFYKGRAPKGKRTNWVVHEYRA 136 .99****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MAVLTLSSLP LGFRFRPTDE ELINFYLRSK INGNHEEVSV IREIDVCKWE PWDLPDLSII 60 KTKDPEWFFF CPQDRKYPNG HRLKRATDAG YWKATGKDRK IKSGTNLIGM KKTLVFYKGR 120 APKGKRTNWV VHEYRATLKE LDGTNPGQSA FVLCRLFKKQ DESIEGSNGD EAEAAISSPT 180 TADSSPGPGD SHSEPILPLV SPSLPGRAES SDEVASETVE HPDGSAEISC FDSYNAEMDP 240 HPYEKKNYCV SEDEPLDSKL FSPLRSQLQA ELGSSGIYYS DSNYLNFDGN ANAVQQLQSG 300 TEESDYIYQF IDSFDCNLDD FALEDFQIPN NTMASLDYRF YGEVEAENSK KSQVMSELES 360 SICLEDIDRK IPIIEHTETA PTEQGQFFNP SGSLPESCNQ LSAAGSTDAT AGIQRISRRQ 420 RSQQQHNEFS ASQGTAPRRL RLQRILAAPS SRSSKMCSAS GGRRDDDPPS ISSKVSARYK 480 VSYNYIYHGV KL

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MAVLTLSSLP LGFRFRPTDE ELINFYLRSK INGNHEEVSV IREIDVCKWE PWDLPDLSII  60
KTKDPEWFFF CPQDRKYPNG HRLKRATDAG YWKATGKDRK IKSGTNLIGM KKTLVFYKGR  120
APKGKRTNWV VHEYRATLKE LDGTNPGQSA FVLCRLFKKQ DESIEGSNGD EAEAAISSPT  180
TADSSPGPGD SHSEPILPLV SPSLPGRAES SDEVASETVE HPDGSAEISC FDSYNAEMDP  240
HPYEKKNYCV SEDEPLDSKL FSPLRSQLQA ELGSSGIYYS DSNYLNFDGN ANAVQQLQSG  300
TEESDYIYQF IDSFDCNLDD FALEDFQIPN NTMASLDYRF YGEVEAENSK KSQVMSELES  360
SICLEDIDRK IPIIEHTETA PTEQGQFFNP SGSLPESCNQ LSAAGSTDAT AGIQRISRRQ  420
RSQQQHNEFS ASQGTAPRRL RLQRILAAPS SRSSKMCSAS GGRRDDDPPS ISSKVSARYK  480
VSYNYIYHGV KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	4e-98	NAC family protein