PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968192.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 272aa MW: 29989.5 Da PI: 6.7159

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.4e-52	33	160	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+evdiyk+ePwdL +++k++++e+yfFs dkky +g r nrat++gyWkatg+d++v XP_022968192.1 33 LAPGFRFHPTDEELVIYYLKRKVCGKSFRF-NAISEVDIYKSEPWDLAgkSRLKSRDQEYYFFSVLDKKYGNGARMNRATSQGYWKATGNDRQVR 126 579***********************99.89**********85348889999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vglkktLvf++grap+g++t+Wvmheyrl XP_022968192.1 127 H-DTRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 160 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MGSETLTLSP PLALTKPVAA ATAAAAAAAP TALAPGFRFH PTDEELVIYY LKRKVCGKSF 60 RFNAISEVDI YKSEPWDLAG KSRLKSRDQE YYFFSVLDKK YGNGARMNRA TSQGYWKATG 120 NDRQVRHDTR TVGLKKTLVF HSGRAPDGKR TNWVMHEYRL VDEELEKAGA GTGSSKDAYV 180 LCRVFHKSNI GPPNGHRYAP FIEEEWDDGG SVLIPGEEIA DGVVASHDTQ SERNSNSVCA 240 AEDRNNHVCG DGKDGMQVSD LSSFEELICY IS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-101	NAC family protein