PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968072.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 357aa MW: 38029.2 Da PI: 9.1414

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130	2.3e-40	55	158	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_022968072.1 55 PPKRTTTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTISAPshfrtsy 149 789******************************************************************99987777777777444444445555 PP TCP 89 ........k 89 + XP_022968072.1 150 fnptqfavR 158 555555541 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MIMDAENGIR RPNFPLQLLE KKEEHHPCST SANNGTSTTT PNLQSSSSSS PNKPPPKRTT 60 TKDRHTKVDG RGRRIRMPAL CAARVFQLTR ELGHKSDGET IEWLLQQAEP AVIAATGTGT 120 IPANFTSLNI SLRSSGSTIS APSHFRTSYF NPTQFAVRTR SDLWDRSNSL VDDSSTFLNF 180 NSPNYVKHDQ GGIDLTEAGK KRRPEQSESS SENPIGNYLV QSNSGSIPAS HGTAVPTTFW 240 MMTNPSNPAS DPMWTFPSMS SSSMFRGAAA AGGSGGFHFM NLPPPMALLP TAQPLGSGIG 300 GSGGGPATDT HLGMLAALSA YRTMPGLSVS ESPTRGVAAV HQSGNEAHDS TSNRDQS

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MIMDAENGIR RPNFPLQLLE KKEEHHPCST SANNGTSTTT PNLQSSSSSS PNKPPPKRTT  60
TKDRHTKVDG RGRRIRMPAL CAARVFQLTR ELGHKSDGET IEWLLQQAEP AVIAATGTGT  120
IPANFTSLNI SLRSSGSTIS APSHFRTSYF NPTQFAVRTR SDLWDRSNSL VDDSSTFLNF  180
NSPNYVKHDQ GGIDLTEAGK KRRPEQSESS SENPIGNYLV QSNSGSIPAS HGTAVPTTFW  240
MMTNPSNPAS DPMWTFPSMS SSSMFRGAAA AGGSGGFHFM NLPPPMALLP TAQPLGSGIG  300
GSGGGPATDT HLGMLAALSA YRTMPGLSVS ESPTRGVAAV HQSGNEAHDS TSNRDQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	8e-49	TCP family protein