PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022967891.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 248aa MW: 28210.5 Da PI: 5.0204 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91 | 5.9e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRrng++KKA+ELSvLCdaeva+++fsstg+lye+ss XP_022967891.1 9 KKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSS 59 68***********************************************96 PP | |||||||
2 | K-box | 51 | 6.3e-18 | 101 | 175 | 26 | 100 |
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e +L+ + ++ G++L+sLs++eLq+Le qL +++ +i++kK+ llleq+++ + + + + +en++Lrk+lee XP_022967891.1 101 DEFVKLKLTYMQMRGQELDSLSFRELQNLECQLREGIVSIKDKKESLLLEQLQRCRSQGEVVISENETLRKQLEE 175 5667788888999***********************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MGRGRVEIKK IENINSRQVT FSKRRNGLMK KAKELSVLCD AEVAIVVFSS TGRLYEFSST 60 SMEHTLSRYR GQGMELDFPR ETLDHPTQLP PSDSDAKSSE DEFVKLKLTY MQMRGQELDS 120 LSFRELQNLE CQLREGIVSI KDKKESLLLE QLQRCRSQGE VVISENETLR KQLEEFQQRN 180 NTPLLESSPL QRSYFSDSKT ASTNETEAET EAEENDCSEI SLHLGLSLDG RQNRKRSVEG 240 TSNDTAGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 6e-54 | MIKC_MADS family protein |