PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967674.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 233aa MW: 26213.8 Da PI: 8.276

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+++++++G g+W++ ++ g+ R++k+c++rw +yl XP_022967674.1 14 KGPWTPQEDQILINYITLYGHGNWRALPKQSGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	49.3	1.2e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE++ ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_022967674.1 67 RGNLTKEEEDTIIKLHRVLGNR-WSAIAARLP-GRTDNEIKNVWNTHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MVRAPCCEKM GLKKGPWTPQ EDQILINYIT LYGHGNWRAL PKQSGLLRCG KSCRLRWINY 60 LRPDIKRGNL TKEEEDTIIK LHRVLGNRWS AIAARLPGRT DNEIKNVWNT HLKKRQNYAA 120 LNQPICGGDQ ESAAQPFKLT TFHSMQNPAS ASSPLYCSTE SSSIVLPENG DLSTNNLPEA 180 DENFWVEVLA GDRIATMSQQ GFGGESQGQF GNLTMDKLDS VDFWYNICPR LGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06180.1	7e-73	MYB family protein