PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022967673.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 234aa MW: 26284.8 Da PI: 8.276

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022967673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.4e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +g+WT++Ed++l+++++++G g+W++ ++ + R++k+c++rw +yl XP_022967673.1 14 KGPWTPQEDQILINYITLYGHGNWRALPKQSAgLLRCGKSCRLRWINYL 62 79*********************************************97 PP
2	Myb_DNA-binding	49.3	1.2e-15	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE++ ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_022967673.1 68 RGNLTKEEEDTIIKLHRVLGNR-WSAIAARLP-GRTDNEIKNVWNTHL 113 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MVRAPCCEKM GLKKGPWTPQ EDQILINYIT LYGHGNWRAL PKQSAGLLRC GKSCRLRWIN 60 YLRPDIKRGN LTKEEEDTII KLHRVLGNRW SAIAARLPGR TDNEIKNVWN THLKKRQNYA 120 ALNQPICGGD QESAAQPFKL TTFHSMQNPA SASSPLYCST ESSSIVLPEN GDLSTNNLPE 180 ADENFWVEVL AGDRIATMSQ QGFGGESQGQ FGNLTMDKLD SVDFWYNICP RLGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06180.1	1e-71	MYB family protein