PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022967654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 208aa MW: 24100.5 Da PI: 9.832 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 58.3 | 2.6e-18 | 9 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatg 87 lp+G+rF+Ptd +l+ +yL+ k++g + ++ + d+y ++ePw++ ++ + +++yfF+k +++++++ + nr++ +g+W+ XP_022967654.1 9 LPVGVRFRPTDPQLL-RYLNFKIHGLPYFK-GAVLDGDLYgEMEPWEIWLRFGGiAGEHLYFFTKLKRSTNNSGrlsaHINRKVGlaNGTWSGEN 101 799************.9**********655.556666766378*****844433277899******9999986623223455433559*****99 PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++ +++ +g k + + + + p+ ++ +W+mhey+l XP_022967654.1 102 SGSPIFATktDKQIIGYCKCFRYENIQLPQ-HHGEWFMHEYSL 143 999*9998767888*********9888888.89********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MDSRNHSLLP VGVRFRPTDP QLLRYLNFKI HGLPYFKGAV LDGDLYGEME PWEIWLRFGG 60 IAGEHLYFFT KLKRSTNNSG RLSAHINRKV GLANGTWSGE NSGSPIFATK TDKQIIGYCK 120 CFRYENIQLP QHHGEWFMHE YSLHQDSIHQ VVDSDYVLCR LSKHGRLKRK LPKNLELQQH 180 SKKRITAPRS TIGQDIMSNM TIDQDFNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 2e-13 | NAC family protein |