PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966869.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 337aa MW: 37365.3 Da PI: 10.2061

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.5	3.5e-18	48	136	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v +L+ea+++++ +r+klk+++We+v++++ ++ f++spk qCk+k+e+++kry+ + +++ + + +ss++p++++l+ XP_022966869.1 48 EWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVsSRANFTKSPKtqtQCKNKIESMKKRYRSESASAVDA-AAASSSWPLYHRLD 136 5***********************************756667776643339****************97.677779****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MDINPTPSPP ISDTNHHHQP LPSAATHGDP SPRKALSSTV GDRLKRDEWS EGAVATLLEA 60 YESKWVLRNR AKLKGHDWED VARHVSSRAN FTKSPKTQTQ CKNKIESMKK RYRSESASAV 120 DAAAASSSWP LYHRLDLLLR GNTQPPPLAT SVILVDALPP PPPPPLSPPP FTATLNCLGS 180 NGVDGIIPKE DGVDETRVSD KEEKNKNKSN KVVLETDSST PAMPYSDNEK LRSKQQPKAK 240 KTKKKKKKKT RMSDELDEIA SSIRWLAEVV TRSEQTRMET MRDMERMRAE AEAKRGEMDL 300 KRTEIIANTQ LEIAKLFAAG GKAADSSSRI GRPTSFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	248	KKTKKKKKK
2	243	249	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	3e-78	Trihelix family protein