PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965926.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 335aa MW: 35678.2 Da PI: 6.1684

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.3	3.7e-10	185	229	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P++ K + a++L + v+Y+k L XP_022965926.1 185 HSIAERLRRERIAERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 229 99*********************8.....6**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MAGIPSEGLG DDFFEQILAV QPGYAAGATG DVVSIPMGLQ LGSGGGGGGD GLRGIAGLQG 60 GGGGGGMGMP LGLNLEQGFL RQERFRDELN NNNNNSNNTT NNASSSSTAS SGITERDSSV 120 QHMNALFPSF GHLQQTQQLR PPPPPLHLHQ PFHNQTNPGM VAAVPQPSQI RPRVRARRGQ 180 ATDPHSIAER LRRERIAERM KALQELVPSC NKTDRAAMLD EIVDYVKFLR LQVKVLSMSR 240 LGGAGAVAQL VADVPLSSVE GEGIESGANQ QAWEKWSSDG TEQQVAKLME EDVGAAMQFL 300 QSKALCIMPI SLASAIFRTH QADPPIMVKP EMNTP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	195	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.3	9e-66	bHLH family protein