PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965906.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 237aa MW: 27571.8 Da PI: 7.0197

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	14	60	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd++l ++v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_022965906.1 14 NLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60 56*******************************************97 PP
2	Myb_DNA-binding	52.6	1.1e-16	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_022965906.1 66 RGGMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 67799***************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MEESKAMKQQ AKKNLWKPEE DLILRNYVET HGEGNWATVS QESGLMRGGK SCRLRWKNYL 60 RPNIKRGGMS KEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKNGLQDKR 120 KVNESNSCKK MDEDDGNNKK QKKVINQTSY PQPQMCSDNG ANQAHDIQRR SQEENREVTD 180 LWNMDDITSY YNINCPMVPA NNATFNFDDE PYYNHLDPFF LIEAFGCSSV DASLENM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	7e-64	MYB family protein