PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022965788.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 386aa    MW: 42849.1 Da    PI: 7.3783
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022965788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.34.9e-07139159526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C +f++ G C+ Gd C FaHg
  XP_022965788.1 139 ACADFRK-GNCNKGDACEFAHG 159
                     799****.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MMIDEQPNRP NQKLHVPPWA FMEDPASDGY SHSPGSGVKC DGCSSGDGYS PFYLQEALAM  60
LQQYLPSKEA EVESDLDVSG REPDSPVDTY SSDQFRMYEF KIKKCLRGRS HDWTECPFAH  120
PGEKARRRDP RKYYYSGTAC ADFRKGNCNK GDACEFAHGV FECWLHPARY RTQPCKDGTS  180
CRRRVCFFAH TPEQLRILPQ QSPRSTSSIP SYDGSPLRQA IEACAKQMPY LSSSGTSTPV  240
SPRIESPPQS PMFRSLNRPH ATSSINEMVA SLRSLQLHKE LGKVQSPSSL WNVQVGSPVF  300
GSPGESSARS GFGSLPDTPT PPAVRYLDFW DLGCGEEQAM ARVESGRDLR AKMLEKLRKE  360
NSVACGDQEK PGGGSVDVGW ISELLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-115C3H family protein