PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027185848.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Trihelix
Protein Properties Length: 287aa    MW: 32304.7 Da    PI: 9.3962
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027185848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.21e-1822106274
        trihelix   2 WtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 
                     Wt qe+++Liea+r ++er  +++             ++ +W++v +++++ g+ rs++qC++kw+nl +++kk++e e++ ++ 
  XP_027185848.1  22 WTVQETMVLIEAKRMDDERRMKRQgdsvggekpggkPAELRWKWVEDYCWRNGCLRSQNQCNDKWDNLMRDFKKVREYERRLADH 106
                     **************777777664334555556666599*****************************************997443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MHIVMANQGG NNVLRDYRKG NWTVQETMVL IEAKRMDDER RMKRQGDSVG GEKPGGKPAE  60
LRWKWVEDYC WRNGCLRSQN QCNDKWDNLM RDFKKVREYE RRLADHQQQL ITIGESSSER  120
ERSDEKSYWK LEKNERKANN LPSNLLPQIY DALVEVVEKK VQRGSVVGLV GAGGTTASIP  180
NVPPSSAAAL VGQPSSLPPS MQHLPISPPV SALPLPPPVV AQTPVQQQQQ QQHPHTHPFS  240
QQLPTILIRV SIQTHQQRGE EEGKGPVGEQ VVANHMKLAL QFLGVLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.18e-57Trihelix family protein