PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027183096.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 413aa    MW: 46203.5 Da    PI: 8.6917
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027183096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-20234284255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAaka+++a+ k++g
  XP_027183096.1 234 HYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTFDTAIEAAKAYDRAAFKMRG 284
                     7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    
MATPDEVLAL RQIQEHLFGE LSPTALFFGP ELVIDGDSNL GASNCSSQSQ SQSDSLFGSD  60
SASYDHDHNS NSNSSPSSPV PITDYLSTAD EAEKKQNHCF DHFAQNSVSF ERNDPDFFKH  120
RQTNTIINFS RAPKFETIDF SEFEQKPQVI DLTSTPKPPQ SARDRKPSLT ILPPVKKCAR  180
DRKPSLTILP PVKKFEWIEF SESTHSKQVT EPARQMSLPI QSTQPKKAAE DQRHYRGVRQ  240
RPWGKYAAEI RDPKRRGSRV WLGTFDTAIE AAKAYDRAAF KMRGSKAILN FPLEAGKHAS  300
ESSASSSNKR RREAEEVVVK EVKKCQTPSV VKSEPRASSS NKRGREAEEV VVKEAKKCQT  360
SSAVKSEPES EWPFTPSSWS AMWEQNVDGV FNFSPLSPSS PHPPLGYAQV RVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17490.19e-45ERF family protein