PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027183044.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 223aa MW: 25017.7 Da PI: 6.0386 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.2 | 1e-18 | 46 | 96 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+ +++g+ XP_027183044.1 46 TYHGVRRRS-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAAIAIKGH 96 69****887.**********843...6**********************999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MKGNEQQTSS TSYDPSIKPD AAKEDTRSKR AKKNDHLDAR KGENPTYHGV RRRSWGKWVS 60 EIREPRKKSR IWLGTFATPE MAARAHDVAA IAIKGHSAFL NFPDLAHQLP RPASKLPKDI 120 QAAAAKAAAL AAPTSHDDRE LSPDKLEEPY SPEGTVTSDS SASPVLSHNG RDDDPFLDLP 180 DLFFDLSDHQ FDEFCYKSPW QLAGYESTQG ELWTEDLFLW DHC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 2e-32 | ERF family protein |