PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027182572.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 672aa MW: 78133 Da PI: 7.2629 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 74.6 | 2.1e-23 | 60 | 144 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YAk+ GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++++k+ ++++w++ ++el+HnH ++ XP_027182572.1 60 DFYNGYAKDQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMIVIKLVDSKRWRIVEVELQHNHLVS 144 6*********************999*****************99888.....9**********************************775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 672 aa Download sequence |
MEVVCLNSEP AFNEGDEYEH EGDCASGENA DELCAAPHLK REPPPPTVGL EFDSFDEAYD 60 FYNGYAKDQG FGIRVSNSWF RSKRKERYRA KLSCSSAGFK KKSEANNPRP ETRTGCPAMI 120 VIKLVDSKRW RIVEVELQHN HLVSPEIKRF YKSHKKMILA AQKSQQAEPV KEIHTIKLYR 180 TSVINAAPNG YSKVKERDVR HPTDHSKHLE LKEGDAHAVY NYFCRMKLTN PNFFYLMDLD 240 DEGRLKNIFW ADARSRSAYI YFSDAIAIDT TCLTNKYELP LVSFVGVNHH GQSVLLGCGF 300 LGHESVEYFV WMFRSWLTCM LGRHPQVILT DQSKSLQMAI SEVFPGTRHC YCLSYIMQRV 360 PEKLGGLRGY EAIRKQLNQA VYNSMKIAEF ETAWGSMVGQ HGLGENKWLQ SLHEDRQRWV 420 PVYLKDTSFV GMIPVKENEV SKPLFDGYVH KHTSFKEFLD KYDLALQRKL MKEATGDTES 480 RNCSFELRTK CNFELQLSKV YTKQIFEKFQ IEVEGMYSCF NTRQVNINGP IITFAVKERV 540 EVEESEKEVR QYEVLYETTN MEIRCICSLF NFRGYLCRHA LNVFNYNGVE EIPSQYILPR 600 WSKDYKRRFP LDPFPNDVDV NDYVLRYNHL LSRAIQVIEE GAQSRECWKA SLQGLEELCR 660 KFALENVDEV YL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 0.0 | FAR1 family protein |