PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027181195.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 283aa    MW: 30808.9 Da    PI: 4.9688
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027181195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.8e-1870120155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+++++g
  XP_027181195.1  70 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPSPEMAARAHDVAALSIKG 120
                     68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MICLTMTTDQ LQSLEPESSS NSIFSFSSSP TSPLSPNTAL KTSQNQSNNN NNQDAESKKI  60
KRIRDSSKHP VYRGVRMRNW GKWVSEIREP RKKSRIWLGT FPSPEMAARA HDVAALSIKG  120
TSAILNFPEL AGSLPRPASL SPRDVQAAAA KAAAMEKFDS LSSSSSSSSS TSPSSSNGRT  180
ATSLTLSSSS SSSLSSLVSA IDLSTTSEEL SEIVELPSLG TMSFNETSME LRNDDFAYSD  240
SVDGWLYPPP DQQLWMMSRN GHDDQDDQGG FSSSFESLLW NYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-58ERF family protein