PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027180548.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 263aa MW: 29939.6 Da PI: 4.9995

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027180548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.2	2.5e-12	166	250	10	96
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.grsefelvvkv 96 + +++ l +p + ++++ ++ + +tl+d+ gr+W +l+ +k +++y+ ++GW + +k n ++e D +v +++ gr ++++v+++ XP_027180548.1 166 TKRQNALFIPIDVIKDFRLD--LPENMTLRDPLGRTWPAYLRTWKDGRAYY-SGGWDNLCKVNSIDEEDDCVCEFVpGRGQEKPVMQI 250 5667889*****999888..5667************998887.56*******************98677888887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MWAVELAKVG SEWFFQEGWA KVVQDNLIEH QDFLVFLFDG EKVFDFTIIG NNLLEKEGVG 60 SLKFQLEVEK GNGNGEKAQE LNDMNGDNLI GEKEEPLNGV KRDFQKSTSP TSGSRKYRSE 120 KNGQEGASAS DGINKKARHD LYGASIFRSG EHALPENPYF VTRIRTKRQN ALFIPIDVIK 180 DFRLDLPENM TLRDPLGRTW PAYLRTWKDG RAYYSGGWDN LCKVNSIDEE DDCVCEFVPG 240 RGQEKPVMQI QIIRHKNAPE TCD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	1e-16	B3 family protein