PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027180110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 195aa MW: 22670.6 Da PI: 4.8391 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107.3 | 1.8e-33 | 8 | 126 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGf+FhPtdeel+ ++L++kv++ +++ ++i+e+d+++++Pw+L++k+ ++++wyfFs+ + rat++g W++ d++++++ XP_027180110.1 8 LPPGFHFHPTDEELIGYFLHRKVTNLPCNP-SIIPELDLCSTDPWELNEKALMSQNQWYFFSQVIQ--------GRATEKGHWEELDMDEDIVTS 93 79*************************999.89**************977778899******9755........699****************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 g++ g+kk vf + +k +t+Wvm+ey+l XP_027180110.1 94 AGKKLGIKKYWVFCIDQVQKRIQTNWVMEEYHL 126 **************9999999**********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MGDSRIILPP GFHFHPTDEE LIGYFLHRKV TNLPCNPSII PELDLCSTDP WELNEKALMS 60 QNQWYFFSQV IQGRATEKGH WEELDMDEDI VTSAGKKLGI KKYWVFCIDQ VQKRIQTNWV 120 MEEYHLFKRH VKKGRNGQKD LSEWVLCRVH HANADSQGIY SVQAGNDDEV ELSLLDEVFL 180 SMEDNDDATS FPKLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 4e-50 | NAC family protein |