PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027179973.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 405aa    MW: 43023.4 Da    PI: 5.729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027179973.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-20181230255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a+++a+++++g
  XP_027179973.1 181 RYRGVRRRP-WGKWAAEIRDPY----KaARVWLGTFDTAEAAARAYDEAALRFRG 230
                     7********.**********76....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MCVFEVANSG KRARGENRGG DGEKSLLESL VLPMLSGFDR EQENSAIVSA LARVVAGEAE  60
DIDQELVVMN QGDGGGVVGG YYGAAASSNG DSSSPSACSS WGGGVGEKRG RPELNPDVGL  120
SESVSAVCWA FNDRPPVGSN LGSGAESSLM RTSMAATGAT YTYAATSTNS TEPYTGEPKR  180
RYRGVRRRPW GKWAAEIRDP YKAARVWLGT FDTAEAAARA YDEAALRFRG NKAKLNFPEN  240
VTLLPSSASS TSSSSSLSSS QLMVSDSPNA LFSIVSSSEP IVHTYQVLHH MQNPAYSANF  300
LNSNAAQNQM SFINPSRFLP RQPTSLLDQF LLPSSSTGST FQSTSSSFPP YTIAAPAPSP  360
QTPAYPLFLP VQPPVLKPSS SRSENTADFP MNSWSDSGHH QSSSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.13e-15ERF family protein