PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179883.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 799aa MW: 90840.2 Da PI: 8.4783

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179883.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.3	2.5e-08	32	60	46	88
FAR1 46 kktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 + +C+a+l+v+ + +gkw+vtk+++eHnH+ XP_027179883.1 32 D--------------SCEAMLRVEVKGHGKWVVTKFVKEHNHS 60 3..............5**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 799 aa Download sequence
MRVNQYGRPR SDGIVAREYL CAKDGLKRRG GDSCEAMLRV EVKGHGKWVV TKFVKEHNHS 60 NTSSGKMHYI RPRRYFAGAL KHNVETYPGL VSVPRGVMYV SVDANRIPAE VNHGKYAPLE 120 LNQSIKNTGP LISTSRYPNQ KRTLGRDAQN LLDYFKKMQA ENPGFYYAIQ LDEDNRMANV 180 FWADARSRTA YSHFGDAVRL DTTYRVNQCK VPFAPFTGVN HHGQTILFAC ALLLDESEAT 240 FLWLFKTFLA AMNDRAPASL VTDQDKAMKA AVAHVFPESR HCINKWDVLR EGQEKMAPVC 300 HMHPNFQMEL YNCINLTQTI EEFESAWDSI LDKYDLKGND WLQLLYNIRR HWVPVYFRDS 360 FFAVISPNQG FESSFFDGYV NQQTTLPMFF RQYERALESS FEKEVEADFN TICTSPVLRT 420 PSPMEKQAAN LYTRRIFTKF QEELVETFVY TANRIDGDGA ISTYRVAKFE DDHKAYIVSL 480 NVPEMKANCS CQMFEYCGIL CRHVLTVFTV TNVLTLPSHY ILKRWTRNAK IGSGSDDRGE 540 LNGHESLTSR YNNLCKEAIR YAEDGAIVPE TYNFVLSALK EVGKKVGVLK KNVAKVAPPS 600 SQVTGVGYDD HGTSTSASDT PLLWPRQDEM IQRFNLNDAS TQSAEVNLPR IAPVSLHRAD 660 NPAENTMVLP CLKSMTWVME NKNSIPANRV AVINLKLQDY SRSPSGESEV KFHLSRITLE 720 PMLRSMAYIS EQLNTPANKV AVINLKLQDT ETTSGESEVK FQVSRDTLGA MLRSMAYIRE 780 QLSSAVEPQQ QIPSKKQRR

Sequence ? help Back to Top

Protein Sequence Length: 799 aa Download sequence

MRVNQYGRPR SDGIVAREYL CAKDGLKRRG GDSCEAMLRV EVKGHGKWVV TKFVKEHNHS  60
NTSSGKMHYI RPRRYFAGAL KHNVETYPGL VSVPRGVMYV SVDANRIPAE VNHGKYAPLE  120
LNQSIKNTGP LISTSRYPNQ KRTLGRDAQN LLDYFKKMQA ENPGFYYAIQ LDEDNRMANV  180
FWADARSRTA YSHFGDAVRL DTTYRVNQCK VPFAPFTGVN HHGQTILFAC ALLLDESEAT  240
FLWLFKTFLA AMNDRAPASL VTDQDKAMKA AVAHVFPESR HCINKWDVLR EGQEKMAPVC  300
HMHPNFQMEL YNCINLTQTI EEFESAWDSI LDKYDLKGND WLQLLYNIRR HWVPVYFRDS  360
FFAVISPNQG FESSFFDGYV NQQTTLPMFF RQYERALESS FEKEVEADFN TICTSPVLRT  420
PSPMEKQAAN LYTRRIFTKF QEELVETFVY TANRIDGDGA ISTYRVAKFE DDHKAYIVSL  480
NVPEMKANCS CQMFEYCGIL CRHVLTVFTV TNVLTLPSHY ILKRWTRNAK IGSGSDDRGE  540
LNGHESLTSR YNNLCKEAIR YAEDGAIVPE TYNFVLSALK EVGKKVGVLK KNVAKVAPPS  600
SQVTGVGYDD HGTSTSASDT PLLWPRQDEM IQRFNLNDAS TQSAEVNLPR IAPVSLHRAD  660
NPAENTMVLP CLKSMTWVME NKNSIPANRV AVINLKLQDY SRSPSGESEV KFHLSRITLE  720
PMLRSMAYIS EQLNTPANKV AVINLKLQDT ETTSGESEVK FQVSRDTLGA MLRSMAYIRE  780
QLSSAVEPQQ QIPSKKQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein