PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027179866.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 866aa MW: 98203.9 Da PI: 6.5491

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027179866.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.8	1.1e-15	56	127	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fY++YA++vGFs+r+++ + + +g i+ r++ C k g +++ ++ C+a+l+v+ + +gkw+vtk+++eHnH+ XP_027179866.1 56 FYDAYARRVGFSMRVNQYGRPRSDG-IVAREYLCAKDGLKRRGGDS--------------CEAMLRVEVKGHGKWVVTKFVKEHNHS 127 9**************99998888.9********9998877..............************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 866 aa Download sequence
MDIEVIDAED AIVGQHDSVT DDGDDDPHES AELNEDGDVE PYVGLEFDSE EAARAFYDAY 60 ARRVGFSMRV NQYGRPRSDG IVAREYLCAK DGLKRRGGDS CEAMLRVEVK GHGKWVVTKF 120 VKEHNHSNTS SGKMHYIRPR RYFAGALKHN VETYPGLVSV PRGVMYVSVD ANRIPAEVNH 180 GKYAPLELNQ SIKNTGPLIS TSRYPNQKRT LGRDAQNLLD YFKKMQAENP GFYYAIQLDE 240 DNRMANVFWA DARSRTAYSH FGDAVRLDTT YRVNQCKVPF APFTGVNHHG QTILFACALL 300 LDESEATFLW LFKTFLAAMN DRAPASLVTD QDKAMKAAVA HVFPESRHCI NKWDVLREGQ 360 EKMAPVCHMH PNFQMELYNC INLTQTIEEF ESAWDSILDK YDLKGNDWLQ LLYNIRRHWV 420 PVYFRDSFFA VISPNQGFES SFFDGYVNQQ TTLPMFFRQY ERALESSFEK EVEADFNTIC 480 TSPVLRTPSP MEKQAANLYT RRIFTKFQEE LVETFVYTAN RIDGDGAIST YRVAKFEDDH 540 KAYIVSLNVP EMKANCSCQM FEYCGILCRH VLTVFTVTNV LTLPSHYILK RWTRNAKIGS 600 GSDDRGELNG HESLTSRYNN LCKEAIRYAE DGAIVPETYN FVLSALKEVG KKVGVLKKNV 660 AKVAPPSSQV TGVGYDDHGT STSASDTPLL WPRQDEMIQR FNLNDASTQS AEVNLPRIAP 720 VSLHRADNPA ENTMVLPCLK SMTWVMENKN SIPANRVAVI NLKLQDYSRS PSGESEVKFH 780 LSRITLEPML RSMAYISEQL NTPANKVAVI NLKLQDTETT SGESEVKFQV SRDTLGAMLR 840 SMAYIREQLS SAVEPQQQIP SKKQRR

Sequence ? help Back to Top

Protein Sequence Length: 866 aa Download sequence

MDIEVIDAED AIVGQHDSVT DDGDDDPHES AELNEDGDVE PYVGLEFDSE EAARAFYDAY  60
ARRVGFSMRV NQYGRPRSDG IVAREYLCAK DGLKRRGGDS CEAMLRVEVK GHGKWVVTKF  120
VKEHNHSNTS SGKMHYIRPR RYFAGALKHN VETYPGLVSV PRGVMYVSVD ANRIPAEVNH  180
GKYAPLELNQ SIKNTGPLIS TSRYPNQKRT LGRDAQNLLD YFKKMQAENP GFYYAIQLDE  240
DNRMANVFWA DARSRTAYSH FGDAVRLDTT YRVNQCKVPF APFTGVNHHG QTILFACALL  300
LDESEATFLW LFKTFLAAMN DRAPASLVTD QDKAMKAAVA HVFPESRHCI NKWDVLREGQ  360
EKMAPVCHMH PNFQMELYNC INLTQTIEEF ESAWDSILDK YDLKGNDWLQ LLYNIRRHWV  420
PVYFRDSFFA VISPNQGFES SFFDGYVNQQ TTLPMFFRQY ERALESSFEK EVEADFNTIC  480
TSPVLRTPSP MEKQAANLYT RRIFTKFQEE LVETFVYTAN RIDGDGAIST YRVAKFEDDH  540
KAYIVSLNVP EMKANCSCQM FEYCGILCRH VLTVFTVTNV LTLPSHYILK RWTRNAKIGS  600
GSDDRGELNG HESLTSRYNN LCKEAIRYAE DGAIVPETYN FVLSALKEVG KKVGVLKKNV  660
AKVAPPSSQV TGVGYDDHGT STSASDTPLL WPRQDEMIQR FNLNDASTQS AEVNLPRIAP  720
VSLHRADNPA ENTMVLPCLK SMTWVMENKN SIPANRVAVI NLKLQDYSRS PSGESEVKFH  780
LSRITLEPML RSMAYISEQL NTPANKVAVI NLKLQDTETT SGESEVKFQV SRDTLGAMLR  840
SMAYIREQLS SAVEPQQQIP SKKQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein