PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027179522.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 293aa MW: 33677.8 Da PI: 9.6725 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54 | 3.1e-17 | 33 | 123 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv+ +s++l++p f++++ g++ k ++l+ +g+ W+v + + +++++++++GW+ F++ + Lk g+f+vF++dg+s f +v XP_027179522.1 33 FFKVF--LPDVSSQQLRVPPLFVKKFsGLV---CKRIKLRCIDGKIWDVDV--EETQEGVFMKNGWQAFADHHLLKLGEFLVFRYDGNSVF--TV 118 78888..44555566***********7777...357***************..**********************************9***..** PP EEE-S CS B3 95 kvfrk 99 k+fr+ XP_027179522.1 119 KIFRT 123 **996 PP | |||||||
2 | B3 | 40 | 7e-13 | 208 | 291 | 10 | 97 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 ++ + l+l+k f+++++++ + ++l +e+ ++W vk+++ + ++ +++GW F k+n+++egD + + +d+ + +++v+ XP_027179522.1 208 RTQMHKLMLSKGFISKNNIE--LGSNVMLCNEKEEKWPVKFTHFRDGR-ACIGTGWMAFWKDNRMCEGDKFKLVFDEGrGG--KMITVC 291 556688*********99766..5668***************8766664.56899***************988887754233..467666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MTMEKMVKRG RGRPRKDSSS SSYLSFMDVR PEFFKVFLPD VSSQQLRVPP LFVKKFSGLV 60 CKRIKLRCID GKIWDVDVEE TQEGVFMKNG WQAFADHHLL KLGEFLVFRY DGNSVFTVKI 120 FRTHGCKEEA FVREKIAADV KIEPLEDQIA ATEHTSAKHS CNSDGEGNKL DTSRGVREGK 180 QQMSSRFHSQ TVQMERDSEF GSIRSISRTQ MHKLMLSKGF ISKNNIELGS NVMLCNEKEE 240 KWPVKFTHFR DGRACIGTGW MAFWKDNRMC EGDKFKLVFD EGRGGKMITV CKV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 16 | KRGRGRPRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 2e-28 | B3 family protein |