PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027178608.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GeBP | ||||||||
Protein Properties | Length: 412aa MW: 45410.2 Da PI: 5.243 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 119 | 2.5e-37 | 188 | 285 | 2 | 98 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskki 95 lfqrlwse+Dei++L+G++d+ ak++++p +d++af ef+kk+i+ +vsk+ql +KirrLKkK++++ ++ +k +ke +fsk+h+qk++e+skk+ XP_027178608.1 188 LFQRLWSEDDEIAILKGMLDYSAKKKADPINDLNAFLEFIKKNIHTDVSKTQLQDKIRRLKKKYENNAEReKKGNKELTFSKPHEQKAYEFSKKV 282 79******************************************************************9955667899***************** PP DUF573 96 Wgs 98 Wg+ XP_027178608.1 283 WGK 285 *95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MAKPRETAKP DPTVESEEEE ESGEEEEEGS SEESESQPEN EPSEKKTAST PAPATKKPES 60 ATPKTQPTSA AAAASSSDES EDEESGSDTD SDTETPSEKP DPSIKPIASK PMDGPQKTTT 120 TAKKPRSKPN ALGPASPAKS TTGAGAKRTA SAAGSDEGKD AKRSKKKPEA EAESSERKGN 180 SNDDSRRLFQ RLWSEDDEIA ILKGMLDYSA KKKADPINDL NAFLEFIKKN IHTDVSKTQL 240 QDKIRRLKKK YENNAEREKK GNKELTFSKP HEQKAYEFSK KVWGKEKNGD GEENVESTKA 300 NGTAVRKSRS RSAVVGMTPK VDEVEEKLKE VKDLVGEKNV VEGLKNESFG PTDSLRIEEW 360 VLKNGAHLIK DAKKRAELEE KWRELKVKEI ELLARRSELM AEQSNLVLEG LK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25210.1 | 1e-30 | GeBP family protein |