PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027178188.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 148aa MW: 17531.6 Da PI: 5.7432 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 46.4 | 7.3e-15 | 11 | 101 | 1 | 94 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k l+ +d +++ +++p f+++ +++++++++ +++ +sW v++ rkk++ y+ + W +Fvk+++Lk gD ++F+l+++++f XP_027178188.1 11 FIKLLM-EDDFTRE-IRIPYAFVRNLkeKLSSRCTIESEAKNSVRNSWPVRI--RKKGRYyYICRLSWPKFVKDHHLKLGDYLLFHLIDKTTF-- 99 566664.4555555.8*******8778777777877777778888*******..888888677889*********************987766.. PP EE CS B3 93 vv 94 +v XP_027178188.1 100 RV 101 44 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MEQNFNFNPS FIKLLMEDDF TREIRIPYAF VRNLKEKLSS RCTIESEAKN SVRNSWPVRI 60 RKKGRYYYIC RLSWPKFVKD HHLKLGDYLL FHLIDKTTFR VKPYGADCCP KKFNVYNSSS 120 SSSDDESDDG SDDSFDDSDE TEFYSLDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18090.1 | 2e-09 | B3 family protein |