PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027177672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GeBP | ||||||||
Protein Properties | Length: 128aa MW: 14297.2 Da PI: 6.9585 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 47.5 | 5e-15 | 2 | 53 | 46 | 97 |
DUF573 46 sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 s ++ksql+eK+rrL+kKf+ ++++++g ++sf ++hd+ fe+sk++W+ XP_027177672.1 2 SQPYTKSQLSEKLRRLRKKFRVISSRISKGLDQSFLSPHDRALFEISKRLWH 53 67899**********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence |
MSQPYTKSQL SEKLRRLRKK FRVISSRISK GLDQSFLSPH DRALFEISKR LWHPDYADTS 60 PFGGVSGGKA TKSDLVGVEV SFLPEILSGL DPNEVENIEL KWEKSDNVVE GVDFGDMCHA 120 PSPHVPVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 2e-13 | GeBP family protein |