PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027177241.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 218aa MW: 24846.8 Da PI: 9.9758

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027177241.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.5	1.6e-15	109	204	1	87
EEEE-..-HHHHT.T-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sdv++ +rl+l+k+ + + +++ +++ +t++d+sg+ +++ ++ + k++ yvl++GW +F+++++L++ D v++ + + XP_027177241.1 109 FEKQLTGSDVSECqCRLTLSKEEVLDSilpllneqDENIDSGIPVTVYDSSGKDYRMAFQSWSKRKLYVLKSGWTKFCQDHKLRALDWVTIWMFR 203 99******9977*****8887899987444458889*************999*******************99865433 PP S CS B3 87 r 87 + XP_027177241.1 204 H 204 3 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MEDEERVKFV KESKRKRKSI MGSAETSEAS KIINGSIVLD KFMDAEVQQA ASTLLAMSKE 60 VLDPKTANGL RKRVMKTKLK LDRGIGGKLP RLPPVARLNG VIGTCSEPFE KQLTGSDVSE 120 CQCRLTLSKE EVLDSILPLL NEQDENIDSG IPVTVYDSSG KDYRMAFQSW SKRKLYVLKS 180 GWTKFCQDHK LRALDWVTIW MFRHMHTRSP CFVLSFRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03170.1	2e-28	B3 family protein