PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027176089.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 242aa    MW: 26578.5 Da    PI: 6.7845
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027176089.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-19553153
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f+taeeAa+a+++a+  +
  XP_027176089.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAARAYDQAAVLM 53
                    59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAARAYDQAA VLMSGRNAKT  60
NFPVVQNSDD GDAAAEPADS NASIVTGKDG TTYYKVQEGS PSSSPKDLSE ILHAKLRKCS  120
KAPSPSLTCL RLDIENSNIG VWQKRAGPSS DSNWVMTVEL QKNKNTCNSN NNVNIIADDQ  180
GATLSTSSKA AARIDGRSRQ NDQMDEEQRV ALQMIEELLN INSPAATFGI SQEDQGSGFY  240
VD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.16e-64ERF family protein