PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027175236.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 321aa    MW: 34617.7 Da    PI: 5.8517
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027175236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-1783133155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  XP_027175236.1  83 PVYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFACPEMAARAHDVAALSIKG 133
                     68*****998.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MADPPHSETE SSSHSGTLDS AHMHHHRKRG RDDNNTTTTT TSAASRSNND NDTHRSSKNS  60
NSRSQTRNNS NNNNNNNSSS KHPVYRGVRM RAWGKWVSEI REPKKKSRIW LGTFACPEMA  120
ARAHDVAALS IKGNSAILNF PELAGSLPRP ATCSPPDVQA AALKAAQMDF EMDGRAKPGD  180
ESSHSQSSES SSSRVMTPCL SSMTSSSSSS SLLSSVTSSS PSSCTEEVST AAQASEAEEL  240
CEIVELPSLG ASYDSVESAR EELVFMDSVD NMGWDYGHPW LHGSVETYGY FGESHAGLMG  300
MAEVDNPVVS GSFEGLLWQL H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.11e-48ERF family protein