PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027174476.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 839aa MW: 92956 Da PI: 6.0476

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027174476.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	6e-19	698	794	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae+h +++++ ++ + led ++++W++++++ ++ks++y+l+ ++ +Fv+ ngL+egDf+v++ ++ +++ XP_027174476.1 698 QKVLKQSDVGNLGRIVLPKKEAETHlpELESRDGIPIALEDiGTSNVWNMRYRFwpNNKSRMYLLE-NTGDFVRVNGLQEGDFIVIY--SDtKCG 789 79***********************888999999*7778***99777777777777.******************..444898 PP ..EEE CS B3 91 elvvk 95 +++++ XP_027174476.1 790 KYLIR 794 88776 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MSKNASEALQ AGDDGDGLMK GMDVIMEESA FPATAFDDDH MKQDEQVMSV NGGCGEREIW 60 FGRDHRGHDQ DSSLLDDDDD ADVNNDPCSL FYTDFPPIPD FPCMSSSSSS SSTPLPARAV 120 ASTSSSSSSS SSSAATSWAV FKSEPDDSFH RNSEAEMQRY HPLERQCDEV VNAAAAAAAL 180 SSTASMEILP LPDDYCSNRD MNCMNAMENF GYMDLLDNSD IWDPCSIFES ENVNPPQQDH 240 DHQFQERKPA SSACATPNHQ EDQIQAPSQH HQPVEEDGND NGNDGGLYFL QGNSELGVIF 300 LEWLKQNKDH ISAEDMRSIK LKRSTIECAS KRLGCTKEGK KQLLKLILEW VEQYQLHKRR 360 ATEMGSRAAA DFDPISYHYH EQAPAAAAAH ETINPNPNPN PSPTTTDLIN CKSVVPCSHQ 420 DPSTACLSPS PSPWVPPAPP CESCPNSLAA PFPPTMGGYA CDPYSCAAAA TVAVAVPVSN 480 QTMNNANLYL VPAEYHQPTD SPQSWSGPYS MPQAQYNPFP DNTKLPVSGS QAQALYANPY 540 PYQVFDGSSG ERLVRYGSSA TKEARKKRMA RQRRISLHQY RHHHSHHHHT HQNQPQSLVN 600 EQHATRIPAV GDDCTSNSPA NPGNWIYWSP AVPPPAPAPM ASTMRPLVSP DEPSHRQAPT 660 QPVDRAYLQP QQNHQRQVPS SDRKQSWKTE KNLKFLLQKV LKQSDVGNLG RIVLPKKEAE 720 THLPELESRD GIPIALEDIG TSNVWNMRYR FWPNNKSRMY LLENTGDFVR VNGLQEGDFI 780 VIYSDTKCGK YLIRGVKVRQ PGSKSEAKKP ARRNQRNVPQ AANNFALASF KQTVKRTTN

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MSKNASEALQ AGDDGDGLMK GMDVIMEESA FPATAFDDDH MKQDEQVMSV NGGCGEREIW  60
FGRDHRGHDQ DSSLLDDDDD ADVNNDPCSL FYTDFPPIPD FPCMSSSSSS SSTPLPARAV  120
ASTSSSSSSS SSSAATSWAV FKSEPDDSFH RNSEAEMQRY HPLERQCDEV VNAAAAAAAL  180
SSTASMEILP LPDDYCSNRD MNCMNAMENF GYMDLLDNSD IWDPCSIFES ENVNPPQQDH  240
DHQFQERKPA SSACATPNHQ EDQIQAPSQH HQPVEEDGND NGNDGGLYFL QGNSELGVIF  300
LEWLKQNKDH ISAEDMRSIK LKRSTIECAS KRLGCTKEGK KQLLKLILEW VEQYQLHKRR  360
ATEMGSRAAA DFDPISYHYH EQAPAAAAAH ETINPNPNPN PSPTTTDLIN CKSVVPCSHQ  420
DPSTACLSPS PSPWVPPAPP CESCPNSLAA PFPPTMGGYA CDPYSCAAAA TVAVAVPVSN  480
QTMNNANLYL VPAEYHQPTD SPQSWSGPYS MPQAQYNPFP DNTKLPVSGS QAQALYANPY  540
PYQVFDGSSG ERLVRYGSSA TKEARKKRMA RQRRISLHQY RHHHSHHHHT HQNQPQSLVN  600
EQHATRIPAV GDDCTSNSPA NPGNWIYWSP AVPPPAPAPM ASTMRPLVSP DEPSHRQAPT  660
QPVDRAYLQP QQNHQRQVPS SDRKQSWKTE KNLKFLLQKV LKQSDVGNLG RIVLPKKEAE  720
THLPELESRD GIPIALEDIG TSNVWNMRYR FWPNNKSRMY LLENTGDFVR VNGLQEGDFI  780
VIYSDTKCGK YLIRGVKVRQ PGSKSEAKKP ARRNQRNVPQ AANNFALASF KQTVKRTTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	4e-86	B3 family protein