PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027173412.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 587aa MW: 64431.5 Da PI: 8.5247 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.4 | 1.2e-32 | 256 | 313 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ +++++ei+Y+g+Hnh+k XP_027173412.1 256 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERNL-EGHITEIVYKGNHNHPK 313 8****************************************.***************85 PP | |||||||
2 | WRKY | 105.2 | 3.5e-33 | 421 | 479 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_027173412.1 421 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYSGCPVRKHVERASHDLRAVITTYEGKHNHD 479 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 587 aa Download sequence |
MASSGGSLNT SLNSYSSYSF PNQFMAPSFS DLINGNNTST SGNDQGMMNN RSNQDKPPFS 60 WELHDQMINK QAGTTPAEIP KFKSFPPTSL PLSPPPVSPS SFLAFPPSLS PSVLLDSPVL 120 FSNSSTLPSP TTGTFSSLVR KDEDTKFVSD FSFQSQTRRP LSSSSLFHAS AGKSSSQEAS 180 IKQQAGGWNF DNKPSQFIES SAVKHGIISE LAPTTQRLGA EVPATQGSMQ SDPAPDSSHV 240 HYSQPSQYVR EQRKSDDGYN WRKYGQKQVK GSENPRSYYK CTFPNCPTKK KVERNLEGHI 300 TEIVYKGNHN HPKPQSTRRS SSQSIQNPSY THSEISHHSN TLGENAQTDS LPNAENSSAS 360 FGEDEFDQTS AISNSRDDDE NEPDAKRWKG ENDSEAISVS GSKTVREPRI VVQTTSDIDI 420 LDDGYRWRKY GQKVVKGNPN PRSYYKCTYS GCPVRKHVER ASHDLRAVIT TYEGKHNHDV 480 PAARGSGSYA VNRPSAINNN NDLPAAIKPL ATNSNSVYGT NFANSLQNPI PRPQSQAPFT 540 LQMLPSQGRF GISGNSASAN QVQQTGNAFH MAKQEPKDDL FFNSFLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-123 | WRKY family protein |