PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027173113.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 252aa MW: 28239.1 Da PI: 9.6162 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 94.2 | 1e-29 | 11 | 65 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+qLGG+++AtPk il++m+++gLt+ hvkSHLQkYR+ XP_027173113.1 11 KERLKWTQELHSLFEKAVNQLGGPDRATPKGILKAMGIPGLTIFHVKSHLQKYRM 65 68****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 54.8 | 2.2e-17 | 13 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++ l+ +av+qlGg+ t+k I + mg g+t ++ks++qky+ XP_027173113.1 13 RLKWTQELHSLFEKAVNQLGGPdraTPKGILKAMGiPGLTIFHVKSHLQKYR 64 89*************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MGASRSDGSS KERLKWTQEL HSLFEKAVNQ LGGPDRATPK GILKAMGIPG LTIFHVKSHL 60 QKYRMSKFIP ESPNRGNRFE RRSISEILPN FSATSGAQLN EALQMQKEVQ KRLSDQLEVQ 120 RSLKMKIEAQ GRFLERIANE HKNRAANAKP SKPYSPAASL PSLCEESDSE VDRNEIRPAV 180 AAAAEFRAAK RIRIEDDDAL LQKCDLESYN NGHQSPFLLR GLNSPCWAHE MGYPWGVATQ 240 SPMLPALYDP LN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-54 | G2-like family protein |