PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027170152.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

ERF

Protein Properties

Length: 491aa MW: 55098.7 Da PI: 5.5854

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027170152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60	5.7e-19	247	297	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge XP_027170152.1 247 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 297 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MNIFVSMASP KNSGKSKKYV EESQHLAGKE WDRDRRGQGI REFDLSLERQ QQWRPVFDEA 60 SMENRPFKKI KSPERQDPFH QSSSSLPQQT SQPPLSLTPP YDSRGSNPLA FPSPSSSSSR 120 HVFPFAFDGT QQSLESLQHL RAHTFDRNQQ NTVPLFRPLQ QNEQQMISFA PHYLHHQQQQ 180 QQGFAFPPYF AGDVAAGSQH QQQQLLQYWS DALSPRGRMM MMNRLGQGQD PRTLFRPPIQ 240 PINTTKLYRG VRQRHWGKWV AEIRLPRNRT RLWLGTFDTA EDAALAYDRE AFKLRGENAR 300 LNFPELFLGK EKAESSSVAG PDSSASDPPT PHDNSASRSG DQPQQPDQAP EGLNMDVYIP 360 ELPAAALMGD NPDDDSGLGS SEVTASDEVP AFAESSSAAA EGALHPQSSE LVWGEMADAW 420 FNSIPAGWGP GSPVWDDLDS SNNLMLPPDL PFVNLHQQSS HDSDSQRQLD NAASSSSTSY 480 PVRPFFWKDR E

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MNIFVSMASP KNSGKSKKYV EESQHLAGKE WDRDRRGQGI REFDLSLERQ QQWRPVFDEA  60
SMENRPFKKI KSPERQDPFH QSSSSLPQQT SQPPLSLTPP YDSRGSNPLA FPSPSSSSSR  120
HVFPFAFDGT QQSLESLQHL RAHTFDRNQQ NTVPLFRPLQ QNEQQMISFA PHYLHHQQQQ  180
QQGFAFPPYF AGDVAAGSQH QQQQLLQYWS DALSPRGRMM MMNRLGQGQD PRTLFRPPIQ  240
PINTTKLYRG VRQRHWGKWV AEIRLPRNRT RLWLGTFDTA EDAALAYDRE AFKLRGENAR  300
LNFPELFLGK EKAESSSVAG PDSSASDPPT PHDNSASRSG DQPQQPDQAP EGLNMDVYIP  360
ELPAAALMGD NPDDDSGLGS SEVTASDEVP AFAESSSAAA EGALHPQSSE LVWGEMADAW  420
FNSIPAGWGP GSPVWDDLDS SNNLMLPPDL PFVNLHQQSS HDSDSQRQLD NAASSSSTSY  480
PVRPFFWKDR E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	5e-48	ERF family protein