PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027170009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | DBB | ||||||||
Protein Properties | Length: 237aa MW: 26190.6 Da PI: 4.8033 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 17.4 | 9.4e-06 | 4 | 43 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ ++ C ++ lC++C le H H+ XP_027170009.1 4 LCDVCEKAQAAVICCADEAALCAKCDLEVHAAnklaskHQ 43 7******99*********************6566666665 PP | |||||||
2 | zf-B_box | 28.2 | 3.9e-09 | 53 | 94 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + + C+ + ek + +fC +++ l+C+dC + +H+ H XP_027170009.1 53 KLPPCDICREKAAFIFCVEDRALFCQDCDEPIHSAntlaanH 94 6789*****************************655566666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MKILCDVCEK AQAAVICCAD EAALCAKCDL EVHAANKLAS KHQRLHLQSL SNKLPPCDIC 60 REKAAFIFCV EDRALFCQDC DEPIHSANTL AANHQRFLAT GIRVALSSSC NKEGAKSHME 120 PQPPKQQFSS KMPTQQLSSM TSSSWAVDDL LQFSDYDSSD KKGQLEFGEL EWFSDIGLFG 180 ERAGEEALSA AEVPQLPVPQ SSNAASHKTP KLYMPCKKPR IELEDDEEEY FTVPDFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 7e-98 | DBB family protein |