PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027169747.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 369aa MW: 41163.6 Da PI: 8.8001

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027169747.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173	8.7e-54	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ +i evd++kvePwdLp k+k +ekewyfF rdkky+tg r+nrat++gyWkatgkdke+++ XP_027169747.1 17 LPPGFRFHPTDEELITHYLSRKVVDNSFSA-IAIGEVDMNKVEPWDLPWKAKMGEKEWYFFGVRDKKYPTGLRTNRATAKGYWKATGKDKEIFR- 109 79***********************999.88***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgekt+Wv he+rle XP_027169747.1 110 GKSLVGMKKTLVFYKGRAPKGEKTNWVTHEFRLE 143 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MENYSALING DDHQLDLPPG FRFHPTDEEL ITHYLSRKVV DNSFSAIAIG EVDMNKVEPW 60 DLPWKAKMGE KEWYFFGVRD KKYPTGLRTN RATAKGYWKA TGKDKEIFRG KSLVGMKKTL 120 VFYKGRAPKG EKTNWVTHEF RLEGKFSLQN LPKTAKNEWV ICRVFQKTAG GKKIHISGLL 180 RSNSIETEFA PSLLPPLMDS PTYNGASSKP TSLPESGHVH CFSSPFSSAQ NKSLQEDMLL 240 SYFSNPAFAP STSNPLDVFS RGPFSNAFSW TQLGPVQGNY QFPGSIPMQD TSALRTLIES 300 CGQNMLKQSF KTEQQERVSA SQETGISTDM NTEISSVVSN LEMGRKSAVD QAPPSTSVGP 360 QGLVDCLWY

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MENYSALING DDHQLDLPPG FRFHPTDEEL ITHYLSRKVV DNSFSAIAIG EVDMNKVEPW  60
DLPWKAKMGE KEWYFFGVRD KKYPTGLRTN RATAKGYWKA TGKDKEIFRG KSLVGMKKTL  120
VFYKGRAPKG EKTNWVTHEF RLEGKFSLQN LPKTAKNEWV ICRVFQKTAG GKKIHISGLL  180
RSNSIETEFA PSLLPPLMDS PTYNGASSKP TSLPESGHVH CFSSPFSSAQ NKSLQEDMLL  240
SYFSNPAFAP STSNPLDVFS RGPFSNAFSW TQLGPVQGNY QFPGSIPMQD TSALRTLIES  300
CGQNMLKQSF KTEQQERVSA SQETGISTDM NTEISSVVSN LEMGRKSAVD QAPPSTSVGP  360
QGLVDCLWY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-136	NAC family protein