PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027169385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 184aa MW: 20858.2 Da PI: 10.0557 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.5 | 4.7e-08 | 16 | 65 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 + +Er+RR r++ ++eL +l+P+ + psk ls + ++ YI +L XP_027169385.1 16 KTVERNRRIRMKGLIHELTSLVPPqHFV-PSKElLSQRDQIDQVAAYIMQL 65 679*********************6664.5555599999999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MEINNVNDAS TKIDRKTVER NRRIRMKGLI HELTSLVPPQ HFVPSKELLS QRDQIDQVAA 60 YIMQLRERVE NLKKSKELVK SKIETKGTKS RNSAIPGSSI PIVKIREIGS NLEVVLVTGS 120 RKNFALHEVI LVLEEQGVEV VSISISTMDD KICHILHAQV KVSRLGVDTS TIYDKLQKLF 180 NYDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-23 | bHLH family protein |